Jupyter notebook example

Here is an example page built with Jupyter Notebooks

Subsection 1

Here is a subsection

Subsection 2

Here is another subsection.

Here is some $m^at_h$

$$e^{i\pi} = -1$$

And here comes some code!

### python is the default for code cells, since we are running a Python3 kernel. This could be changed though.
import numpy as np
import matplotlib.pyplot as plt

xy = np.random.multivariate_normal([0,0], [[1, 0.8], [0.8, 1]], 1000)
plt.scatter(xy[:,0], xy[:,1], alpha=0.3)

---------------------------------------------------------------------------
ModuleNotFoundError                       Traceback (most recent call last)
Cell In[1], line 2
      1 ### python is the default for code cells, since we are running a Python3 kernel. This could be changed though.
----> 2 import numpy as np
      3 import matplotlib.pyplot as plt
      5 xy = np.random.multivariate_normal([0,0], [[1, 0.8], [0.8, 1]], 1000)

ModuleNotFoundError: No module named 'numpy'

%%bash
## bash cells can be run using %%bash magic

pwd

/home/alh/PycharmProjects/reedgroup.github.io/docs/Section1

%load_ext rpy2.ipython
### Can also use R cells, after installing R and python library rpy2, and loading rpy2.ipython
### following https://evodify.com/python-r-bash-jupyter-notebook/

%%R
### R cell using %%R magic

library(ggforce)
ggplot(iris, aes(Petal.Length, Petal.Width, colour = Species)) +
    geom_point() +
    facet_zoom(x = Species == "versicolor")

R[write to console]: Loading required package: ggplot2

for row in range(6):  
    for col in range(7):  
        if (row==0 and col %3 !=0)or(row==1 and col %3==0) or(row-col==2) or(row+col==8):  
            print("*",end=" ")  
        else:  
            print(end=" ")  
    print() 

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